fix: second wave of #1578 fixes — 43 items across processor, nanoevents, analysis/jetmet/lookup/lumi/ml/btag tools, CI, and dead code - #1597

Draft

NJManganelli wants to merge 66 commits into

scikit-hep:masterfrom

NJManganelli:integration/1578-wave-fixes

Commits on Jul 7, 2026

ci: fail the pass gate on skipped/cancelled jobs and gate release on test-dask-client
Nick Manganelli
committed
915d72a
fix(jetmet): repair raw pt/mass fallbacks in CorrectedJetsFactory init
Nick Manganelli
committed
fc9216b
fix(jetmet): handle empty partitions in rand_gauss
Nick Manganelli
committed
527c378
fix(jetmet): stop build() mutating the input array's layout parameters
Nick Manganelli
committed
bcae11c
fix(jetmet): repair broken format strings in error messages
Nick Manganelli
committed
0e1d923
fix(nanoevents): register subtraction for Candidate so muon1 - muon2 works again
Nick Manganelli
committed
f8d76e5
fix(nanoevents): negative scalar multiply of PtEtaPhiMLorentzVector negates the time component
Nick Manganelli
committed
e990af2
fix(taskvine): drop leftover unconditional raise in _handle_early_terminate
Nick Manganelli
committed
397ca22
fix(taskvine): honor concurrent_reads in accumulate task
Nick Manganelli
committed
904966a
fix(analysis_tools): WeightStatistics + and += return proper objects
Nick Manganelli
committed
5b3e2d4
fix(analysis_tools): fill option-type weights in delayed multivariation
Nick Manganelli
committed
d8cf7c4
fix(analysis_tools): suffix-match Up/Down modifiers and accept multivariation names
Nick Manganelli
committed
303444d
fix(analysis_tools): PackedSelection.require returns an independent mask copy
Nick Manganelli
committed
a7f6a24
fix(lookup_tools): use numpy.int64 for EA multi-binned counts
Nick Manganelli
committed
724ac76
fix(lookup_tools): wire up json_lookup for pileup-JSON path
Nick Manganelli
committed
a59c9e9
fix(nanoevents): correct jet/pf cross-references in PFNano associations
Nick Manganelli
committed
9310f35
fix(processor): decompress processor payload only when it is compressed bytes
Nick Manganelli
committed
9070295
fix(processor): pop timeout from uproot_options to avoid duplicate uproot kwarg
Nick Manganelli
committed
e5baa6f
fix(processor): retry failed tasks regardless of skipbadfiles
Nick Manganelli
committed
edce9dd
fix(processor): support all documented FuturesExecutor mergepool forms
Nick Manganelli
committed
f3205d5
fix(processor): surface recoverable exceptions in the default run path
Nick Manganelli
committed
4aeb876
fix(processor): limit preprocessing to maxchunks files per dataset
Nick Manganelli
committed
0709764
fix(processor): recompress running accumulator only when it changes
Nick Manganelli
committed
7afcd5b
fix(processor): share and clean up auto-created dask client
Nick Manganelli
committed
e8c7f31

Commits on Jul 8, 2026

fix(nanoevents): resolve edm4hep OneToManyRelations to correct types
Nick Manganelli
committed
83d675e
fix(nanoevents): use mixins_dictionary in FCCSchema._unknown_collections
Nick Manganelli
committed
2bf8a5e
fix(nanoevents): raise on unknown FCC.get_schema version
Nick Manganelli
committed
3bfbbcf
fix(nanoevents): preserve factory mode across pickling
Nick Manganelli
committed
c8e4a46
fix(nanoevents): honor buffer_cache in from_preloaded
Nick Manganelli
committed
76d1bc7
fix(nanoevents): don't treat zero-valued index ranges as empty
Nick Manganelli
committed
b16f92d
fix(lumi_tools): consistent uint32 cast and delayed index across call orders
Nick Manganelli
committed
946a67c
fix(dataset_tools): correct rucio mode="first" partial skip and site counts
Nick Manganelli
committed
5fa3407
fix(nanoevents): round-trip non-contiguous arrays through buffer cache
Nick Manganelli
committed
a079d8f
fix(nanoevents): don't require numcodecs for Codec-protocol codecs
Nick Manganelli
committed
a39157c
perf(nanoevents): decode cached buffers once per hit
Nick Manganelli
committed
a03c1ca
fix(processor): use modern register_plugin API for ColumnCache worker plugin
Nick Manganelli
committed
b6dd0c6
fix(dataset_tools): use ast.literal_eval instead of eval on report args
Nick Manganelli
committed
901335c
chore(ci): remove plaintext codecov token from codecov.yml
Nick Manganelli
committed
979c6b6
perf: drop unused numba import from util.py
Nick Manganelli
committed
83bfe5c
fix(ml_tools): check WRITEABLE flag on kwargs in tf_wrapper.numpy_call
Nick Manganelli
committed
846cc5f
fix(ml_tools): convert triton retry backoff from ms to seconds
Nick Manganelli
committed
efdfd34
perf(ml_tools): concatenate triton batch outputs once instead of per batch
Nick Manganelli
committed
85c818c
chore: remove dead parsl chunking code and unused tailtimeout parameter
Nick Manganelli
committed
78766b6
chore: remove dead nanoevents transforms
Nick Manganelli
committed
a04d222
chore: remove dead analysis_tools code
Nick Manganelli
committed
22841cd
chore: remove dead lookup_tools code
Nick Manganelli
committed
57aa6a1
chore: remove dead util helpers
Nick Manganelli
committed
7d64085
perf(nanoevents): cache parsed edm4hep yaml across schema builds
Nick Manganelli
committed
25f4ca0
perf(btag_tools): vectorize dense lookup bin mapping
Nick Manganelli
committed
c6bc406
Merge branch 'fix/1578-jetmet-factory' into integration/1578-wave-fixes
Nick Manganelli
committed
fb95a20
Merge branch 'fix/1578-vector-arithmetic' into integration/1578-wave-fixes
Nick Manganelli
committed
d52ed2c
Merge branch 'fix/1578-taskvine' into integration/1578-wave-fixes
Nick Manganelli
committed
1335154
Merge branch 'fix/1578-analysis-tools' into integration/1578-wave-fixes
Nick Manganelli
committed
5874715
Merge branch 'fix/1578-lookup-tools' into integration/1578-wave-fixes
Nick Manganelli
committed
82e8106
Merge branch 'fix/1578-pfnano' into integration/1578-wave-fixes
Nick Manganelli
committed
90ae76d
Merge branch 'fix/1578-executor' into integration/1578-wave-fixes
Nick Manganelli
committed
42be9bd
Merge branch 'fix/1578-fcc-edm4hep' into integration/1578-wave-fixes
Nick Manganelli
committed
666b5f5
Merge branch 'fix/1578-rucio-lumi' into integration/1578-wave-fixes
Nick Manganelli
committed
d2384a2
Merge branch 'fix/1578-nanoevents-mapping' into integration/1578-wave-fixes
Nick Manganelli
committed
48b5656
Merge branch 'fix/1578-misc-low' into integration/1578-wave-fixes
Nick Manganelli
committed
452d97d
Merge branch 'fix/1578-ml-tools' into integration/1578-wave-fixes
Nick Manganelli
committed
0d1a620
Merge branch 'fix/1578-dead-code' into integration/1578-wave-fixes
Nick Manganelli
committed
7f5f848
Merge branch 'fix/1578-perf' into integration/1578-wave-fixes
Nick Manganelli
committed
fb19eba

Commits on Jul 10, 2026

fix: keep externally-used API — restore dense_evaluated_lookup and nested_local2global, deprecate tailtimeout instead of removing
Nick Manganelli
committed
23d3a13
Merge branch 'fix/1578-dead-code' into integration/1578-wave-fixes
Nick Manganelli
committed
57c5fbf

Commits on Jul 14, 2026

docs(nanoevents): describe candidate subtraction/negative-scaling tests by behavior
Nick Manganelli
committed
c7c8a2f