add export particles folder suffix and abspath - #445
Open
jamesmkrieger wants to merge 28 commits into
Open
Conversation
remove incorrect flag
fix validation
in the resize operation halves were not resized
bump version
pin emtools because imports change every release
… jmk_export_suffix
…relion into jmk_export_suffix
jamesmkrieger
force-pushed
the
jmk_export_suffix
branch
from
December 23, 2025 11:11
d8682a8 to
2145e85
Compare
Author
|
There's now an option to include the absolute path in the star file, which is also helpful for importing back into relion. This is passed through to convert31.py as a keyword argument to override creating the relative path, so as not to break the logic using outputDir for making multiple stacks. |
azazellochg
removed their request for review
May 22, 2026 07:54
ratolon
self-requested a review
July 1, 2026 16:09
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
This allows one to make a folder called Particles2, for example, so that relion can import multiple of them from symbolic links in the project folder.