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simularium / simulariumio Public

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NERDSS Converter#178

Merged

ascibisz merged 17 commits intomainsimularium/simulariumio:mainfrom

feature/nerdss-convertersimularium/simulariumio:feature/nerdss-converterCopy head branch name to clipboard

Mar 12, 2025

Conversation Commits17 (17)Checks Files changed

Merged

NERDSS Converter#178
ascibisz merged 17 commits intomainfrom
feature/nerdss-converter

Commits

Commits on Feb 12, 2025

basic read of PDB data as spheres, convert to simularium file format
ascibisz
committed
add starting functionality for drawing bonds between molecules
ascibisz
committed
code cleanup
ascibisz
committed
adding more comments
ascibisz
committed
lint fixes
ascibisz
committed
Add jupyter notebook for NERDSS PDB data, plus a few test files
ascibisz
committed
add DisplayData for bond fibers to example
ascibisz
committed
clean up code for fiber agents
ascibisz
committed
simplify test files
ascibisz
committed
add test for nerdss converter
ascibisz
committed
nerdss converter code cleanup
ascibisz
committed
clean up nerdss tests
ascibisz
committed
revert changes to unit_data
ascibisz
committed
revert changes to unit_data
ascibisz
committed
formatting fixes
ascibisz
committed

Commits on Mar 12, 2025

incorporate PR feedback
ascibisz
committed
lint fixes
ascibisz
committed

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