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feat: enable gzip output for bedtools wrappers #6418

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feat: enable gzip output for bedtools wrappers

feat: enable gzip output for bedtools wrappers #6418

Re-run triggered February 7, 2025 07:32
@fgvieirafgvieira
#3642
gtuckerkellogg:bedtools-gzip-output
Status Failure
Total duration 1m 13s
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qc.yml

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1 error and 4 warnings
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Process completed with exit code 1.
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/usr/share/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
formatting
Mamba support is still experimental and can result in differently solved environments!
linting
/usr/share/miniconda3/lib/python3.12/site-packages/conda/base/context.py:201: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3. To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: conda config --add channels defaults For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html deprecated.topic(
linting
Mamba support is still experimental and can result in differently solved environments!