Skip to content

WIP: Release 0.1.11#47

Closed
moinfar wants to merge 21 commits into
mainfrom
release_0_1_10
Closed

WIP: Release 0.1.11#47
moinfar wants to merge 21 commits into
mainfrom
release_0_1_10

Conversation

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.12.2 → v0.14.0](astral-sh/ruff-pre-commit@v0.12.2...v0.14.0)
- [github.com/pre-commit/pre-commit-hooks: v5.0.0 → v6.0.0](pre-commit/pre-commit-hooks@v5.0.0...v6.0.0)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
@codecov

codecov Bot commented Oct 17, 2025

Copy link
Copy Markdown

Codecov Report

❌ Patch coverage is 84.90566% with 24 lines in your changes missing coverage. Please review.
✅ Project coverage is 71.36%. Comparing base (6c43dd3) to head (c46d28e).
⚠️ Report is 25 commits behind head on main.

Files with missing lines Patch % Lines
src/drvi/scvi_tools_based/model/_drvi.py 76.74% 10 Missing ⚠️
src/drvi/nn_modules/noise_model.py 81.57% 7 Missing ⚠️
src/drvi/scvi_tools_based/nn/_base_components.py 78.57% 3 Missing ⚠️
...c/drvi/scvi_tools_based/model/base/_archesmixin.py 66.66% 2 Missing ⚠️
...i/scvi_tools_based/model/base/_generative_mixin.py 94.73% 1 Missing ⚠️
src/drvi/scvi_tools_based/module/_drvi.py 97.29% 1 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main      #47      +/-   ##
==========================================
+ Coverage   69.57%   71.36%   +1.79%     
==========================================
  Files          49       49              
  Lines        2524     2633     +109     
==========================================
+ Hits         1756     1879     +123     
+ Misses        768      754      -14     
Files with missing lines Coverage Δ
src/drvi/nn_modules/embedding.py 82.94% <100.00%> (+0.20%) ⬆️
...i/scvi_tools_based/model/base/_generative_mixin.py 77.57% <94.73%> (+1.52%) ⬆️
src/drvi/scvi_tools_based/module/_drvi.py 86.97% <97.29%> (+6.20%) ⬆️
...c/drvi/scvi_tools_based/model/base/_archesmixin.py 72.26% <66.66%> (+0.41%) ⬆️
src/drvi/scvi_tools_based/nn/_base_components.py 83.84% <78.57%> (-0.28%) ⬇️
src/drvi/nn_modules/noise_model.py 80.84% <81.57%> (+11.96%) ⬆️
src/drvi/scvi_tools_based/model/_drvi.py 74.76% <76.74%> (-1.29%) ⬇️
🚀 New features to boost your workflow:
  • ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

moinfar and others added 20 commits November 16, 2025 18:40
* Support RnaSeqMixin

* Code Improvement

* BugFix

* BugFix

* BugFix

* BugFix for issue #46

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* decode in log space by default.
This aligns with traverse data's current settings.

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
@moinfar moinfar changed the title WIP: Release 0.1.10 WIP: Release 0.1.11 Nov 18, 2025
@moinfar moinfar closed this Nov 18, 2025
@moinfar moinfar deleted the release_0_1_10 branch November 19, 2025 13:51
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

decode_latent_samples returnsnon-library size normalised expression values

1 participant