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\begin{enumerate}

\item Zhao C, Jarecka D, Covitz S, Chen Y, Eickhoff SB, Fair DA, Franco AR, Halchenko YO, Hendrickson TJ, Hoffstaedter F, Houghton A, Kiar G, Macdonald A, Mehta K, Milham MP, \textbf{Salo T}, Hanke M, Ghosh SS, Cieslak M, \& Satterthwaite TD.
(2024).
A reproducible and generalizable software workflow for analysis of large-scale neuroimaging data collections using BIDS Apps.
\emph{Imaging Neuroscience}.

\item Peraza JA, \textbf{Salo T}, Riedel MC, Bottenhorn KL, Poline J, Dockès J, Kent JD, Bartley JE, Flannery JS, Hill-Bowen LD, Lobo RP, Poudel R, Ray KL, Robinson JL, Laird RW, Sutherland MT, Vega Adl, \& Laird AR.
(2024).
Methods for decoding cortical gradients of functional connectivity.
\emph{Imaging Neuroscience}.

\item \textbf{Salo T}, Yarkoni T, Nichols TE, Poline JB, Bilgel M, Bottenhorn KL, Jarecka D, Kent JD, Kimbler A, Nielson DM, Oudyk KM, Peraza JA, Pérez A, Reeders PC, Yanes JA, \& Laird AR.
(2023).
NiMARE: Neuroimaging Meta-Analysis Research Environment.
\emph{Aperture}.
\doi{10.52294/001c.87681}.

\item Smith DD, Meca A, Bottenhorn KL, Bartley JE, Riedel MC, \textbf{Salo T}, Peraza JA, Laird RW, Pruden SM, Sutherland MT, Brewe E, \& Laird AR.
(2023).
Task-based attentional and default mode connectivity associated with science and math anxiety profiles among university physics students.
\emph{Trends in Neuroscience and Education}.

\item Meca A, Peraza JA, Riedel MC, Hale W, Pettit JW, Musser ED, \textbf{Salo T}, Flannery JS, Bottenhorn KL, Dick AS, Lobo RP, Ucros LM, Greaves CA, Hawes SW, Sanchez M, Gonzalez MR, Sutherland MT, Gonzalez R, \& Laird AR.
(2023).
Acculturative orientations among Hispanic/Latinx caregivers in the ABCD Study: Associations with caregiver and youth mental health and youth brain function.
\emph{Biological Psychiatry Global Open Science}.

\item Lobo RP, Bottenhorn KL, Riedel MC, Toma AI, Hare MM, Smith DD, Moor AC, Cowan IK, Valdes JA, Bartley JE, \textbf{Salo T}, Boeving ER, Pankey B, Sutherland MT, Musser ED, \& Laird AR.
(2023).
Neural systems underlying RDoC social constructs: An activation likelihood estimation meta-analysis.
\emph{Neuroscience \& Biobehavioral Reviews 144}.

\item Poudel R, Tobia MJ, Riedel MC, \textbf{Salo T}, Flannery JS, Hill-Bowen LD, Dick AS, Laird AR, Parra CM, \& Sutherland MT.
(2022).
Risky decision-making strategies mediate the relationship between amygdala activity and real-world financial savings among individuals from lower income households: A pilot study.
\emph{Behavioural Brain Research}.

\item Flannery JS, Riedel MC, Hill-Bowen LD, Poudel R, Bottenhorn KL, \textbf{Salo T}, Laird AR, Gonzalez R, \& Sutherland MT.
(2022).
Altered large-scale brain network interactions associated with HIV infection and error processing.
\emph{Network Neuroscience}.

\item Flannery JS, Riedel MC, \textbf{Salo T}, Hill-Bowen LD, Poudel R, Adams AR, Laird AR, Gonzalez R, \& Sutherland MT.
(2022).
Interactive effects of HIV infection and cannabis use on insula subregion functional connectivity.
\emph{Journal of Neuroimmune Pharmacology}.

\item Hill-Bowen LD, Riedel MC, \textbf{Salo T}, Flannery JS, Poudel R, Laird AR, \& Sutherland MT.
(2022).
Convergent gray matter alterations across drugs of abuse and network-level implications: A meta-analysis of structural MRI studies.
\emph{Drug and Alcohol Dependence}.

\item Pankey BS, Riedel MC, Cowan I, Bartley JE, Lobo RP, Hill-Bowen LD, \textbf{Salo T}, Musser ED, Sutherland MT, \& Laird AR.
(2022).
Extended functional connectivity of convergent structural alterations among individuals with PTSD: A neuroimaging meta-analysis.
\emph{Behavioral and Brain Functions}.

\item Bouget MH, Kamentsky L, Ghosh SS, Mazzamuto G, Lazari A, Markiewicz CJ, Oostenveld R, Niso G, Halchenko YO, Lipp I, Takerkart S, Toussaint PJ, Khan AR, Nilsonne G, Castelli FM, \textbf{The BIDS Maintainers}\footnote{Member of the BIDS maintainers group}, \& Cohen-Adad J.
(2022).
Microscopy-BIDS: An Extension to the Brain Imaging Data Structure for Microscopy Data.
\emph{Frontiers in Neuroscience}.
\doi{10.3389/fnins.2022.871228}.

\item Karakuzu A, Appelhoff S, Auer T, Boudreau M, Feingold F, Khan AR, Lazari A, Markiewicz C, Mulder M, Phillips C, \textbf{Salo T}, Stikov N, Whitaker K, \& Hollander GD.
(2022).
qMRI-BIDS: An extension to the brain imaging data structure for quantitative magnetic resonance imaging data.
\emph{Scientific data}.

\item Clement P, Castellaro M, Okell TW, Thomas DL, Vandemaele P, Elgayar S, Oliver-Taylor A, Kirk T, Woods JG, Vos SB, Kuijer JP, Achten E, Osch MJv, Detre JA, Lu H, Alsop DC, Chappell MA, Hernandez-Garcia L, Petr J, \& Mutsaerts HJ.
(2022).
ASL-BIDS, the brain imaging data structure extension for arterial spin labeling.
\emph{Scientific Data}.

\item Poudel R, Tobia MJ, Riedel MC, \textbf{Salo T}, Flannery JS, Hill-Bowen LD, Dick AS, Laird AR, Parra CM, \& Sutherland MT.
(2022).
Risky decision-making strategies mediate the relationship between amygdala activity and real-world financial savings among individuals from lower income households: A pilot study.
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\bigskip

\begin{center}\sectionstyle{ACCEPTED IN PRINCIPLE}\end{center}
\begin{center}\sectionstyle{PREPRINTS}\end{center}

\begin{enumerate}

\item \textbf{Salo T}, Bottenhorn KL, DuPre EM, Riedel MC, Handwerker DA, \& Laird AR.
(2022).
Can multi-echo denoising remove motion-related noise? A replication \& extension of Power et al. (2018).
\emph{Royal Society Open Science}.

\end{enumerate}

\bigskip

\begin{center}\sectionstyle{PREPRINTS}\end{center}
\item Peraza JA, \textbf{Salo T}, Riedel MC, Bottenhorn KL, Poline J, Dockès J, Kent JD, Bartley JE, Flannery JS, Hill-Bowen LD, Lobo RP, Poudel R, Ray KL, Robinson JL, Laird RW, Sutherland MT, Vega Adl, \& Laird AR.
(2023).
Meta-analytic decoding of the cortical gradient of functional connectivity.
\emph{bioRxiv}.

\begin{enumerate}
\item Mehta KP, \textbf{Salo T}, Madison T, Adebimpe A, Bassett DS, Bertolero M, Cieslak M, Covitz S, Houghton A, Keller AS, Luo A, Dominguez OM, Nelson S, Shafiei G, Shanmugan S, Shinohara R, Sydnor VJ, Feczko E, Fair DA, \& Satterthwaite TD.
(2023).
XCP-D: A Robust Pipeline for the post-processing of fMRI data.
\emph{bioRxiv}.

\item \textbf{Salo T}, Yarkoni T, Nichols TE, Poline JB, Bilgel M, Bottenhorn KL, Jarecka D, Kent JD, Kimbler A, Nielson DM, Oudyk KM, Peraza JA, Pérez A, Reeders PC, Yanes JA, \& Laird AR.
(2022).
NiMARE: Neuroimaging Meta-Analysis Research Environment.
\emph{NeuroLibre}.\footnote{This preprint is an interactive Jupyter book in which users can execute NiMARE analyses online. It has been submitted to Aperture for peer review and publication.}
\item Van AN, Montez DF, Laumann TO, Suljic V, Madison T, Baden NJ, Ramirez-Perez N, Scheidter KM, Monk JS, Whiting FI, Adeyemo B, Chauvin RJ, Krimmel SR, Metoki A, Rajesh A, Roland JL, \textbf{Salo T}, Wang A, Weldon KB, Sotiras A, Shimony JS, Kay BP, Nelson SM, Tervo-Clemmens B, Marek SA, Vizioli L, Yacoub E, Satterthwaite TD, Gordon EM, Fair DA, Tisdall D, \& Dosenbach NU.
(2023).
Framewise multi-echo distortion correction for superior functional MRI.
\emph{bioRxiv}.

\item Pankey BS, Riedel MC, Cowan I, Bartley JE, Lobo RP, Hill-Bowen LD, \textbf{Salo T}, Musser ED, Sutherland MT, \& Laird AR.
(2022).
Extended functional connectivity of convergent structural alterations among individuals with PTSD: A neuroimaging meta-analysis.
\item Diveica V, Riedel MC, \textbf{Salo T}, Laird AR, Jackson RL, \& Binney RJ.
(2023).
Graded functional organisation in the left inferior frontal gyrus: evidence from task-free and task-based functional connectivity.
\emph{bioRxiv}.
\doi{10.1101/2022.04.07.487478}.

\item Lobo RP, Bottenhorn KL, Riedel MC, Toma AI, Hare MM, Smith DD, Moor AC, Cowan IK, Valdes JA, Bartley JE, \textbf{Salo T}, ..., \& Laird AR.
(2022).
Neural systems underlying RDoC social constructs: An activation likelihood estimation meta-analysis.
\item Shafiei G, Keller AS, Bertolero M, Shanmugan S, Bassett DS, Chen AA, Covitz S, Houghton A, Luo A, Mehta K, \textbf{Salo T}, Shinohara RT, Fair D, Hallquist MN, \& Satterthwaite TD.
(2023).
Generalizable links between symptoms of borderline personality disorder and functional connectivity.
\emph{bioRxiv}.
\doi{10.1101/2022.04.04.487016}.

\item Bottenhorn KL, \textbf{Salo T}, Riedel MC, Sutherland MT, Robinson JL, Musser ED, \& Laird AR.
(2021).
Denoising physiological data collected during multi-band, multi-echo EPI sequences.
\item Luo A, Sydnor VJ, Pines A, Larsen B, Alexander-Bloch AF, Cieslak M, Covitz S, Chen A, Esper NB, Feczko E, Franco AR, Gur RE, Gur RC, Houghton A, Hu F, Keller AS, Kiar G, Mehta K, Salum GA, Tapera T, Xu T, Zhao C, Fair DA, \textbf{Salo T}, Shinohara RT, Milham MP, \& Satterthwaite TD.
(2023).
Functional Connectivity Development along the Sensorimotor-Association Axis Enhances the Cortical Hierarchy.
\emph{bioRxiv}.
\doi{10.1101/2021.04.01.437293}.

\item Poldrack RA, Markiewicz CJ, Appelhoff S, Ashar YK, Auer T, Baillet S, Bansal S, Beltrachini L, Benar CG, Bertazzoli G, Bhogawar S, Blair RW, Bortoletto M, Boudreau M, Brooks TL, Calhoun VD, Castelli FM, Clement P, Cohen AL, Cohen-Adad J, d'Ambrosio S, Hollander Gd, Iglesia-Vayá Mdl, Vega Adl, Delorme A, Devinsky O, Draschkow D, Duff EP, DuPre E, Earl E, Esteban O, Feingold FW, Flandin G, Galassi A, Gallitto G, Ganz M, Gau R, Gholam J, Ghosh SS, Giacomel A, Gillman AG, Gleeson P, Gramfort A, Guay S, Guidali G, Halchenko YO, Handwerker DA, Hardcastle N, Herholz P, Hermes D, Honey CJ, Innis RB, Ioanas H, Jahn A, Karakuzu A, Keator DB, Kiar G, Kincses B, Laird AR, Lau JC, Lazari A, Legarreta JH, Li A, Li X, Love BC, Lu H, Maumet C, Mazzamuto G, Meisler SL, Mikkelsen M, Mutsaerts H, Nichols TE, Nikolaidis A, Nilsonne G, Niso G, Norgaard M, Okell TW, Oostenveld R, Ort E, Park PJ, Pawlik M, Pernet CR, Pestilli F, Petr J, Phillips C, Poline J, Pollonini L, Raamana PR, Ritter P, Rizzo G, Robbins KA, Rockhill AP, Rogers C, Rokem A, Rorden C, Routier A, Saborit-Torres JM, \textbf{Salo T}, Schirner M, Smith RE, Spisak T, Sprenger J, Swann NC, Szinte M, Takerkart S, Thirion B, Thomas AG, Torabian S, Varoquaux G, Voytek B, Welzel J, Wilson M, Yarkoni T, \& Gorgolewski KJ.
(2023).
The past, present, and future of the brain imaging data structure (BIDS).
\emph{arXiv}.

\item Bottenhorn K, Bartley J, Riedel M, \textbf{Salo T}, Bravo E, Odean R, Nazareth A, Laird R, Pruden S, \& Sutherland M.
(2021).
Intelligence and academic performance: Is it all in your head?.
\emph{bioRxiv}.
\doi{10.1101/2021.01.23.427928}.

\item Clement P, Castellaro M, Okell TW, Thomas DL, Vandemaele P, Elgayar S, Oliver-Taylor A, Kirk T, Woods JG, Vos S, ..., \textbf{The BIDS Maintainers}\footnote{Member of the BIDS maintainers group}, ..., \& Mutsaerts H.
(2021).
ASL-BIDS, the brain imaging data structure extension for arterial spin labeling.
\emph{PsyArXiv}.
\doi{10.31234/osf.io/e87y3}

\item Karakuzu A, Appelhoff S, Auer T, Boudreau M, Feingold F, Khan AR, Lazari A, Markiewicz C, Mulder MJ, Phillips C, \textbf{Salo T}, ..., \& de Hollander G.
(2021).
qMRI-BIDS: An extension to the brain imaging data structure for quantitative magnetic resonance imaging data.
\emph{medRxiv}.
\doi{10.1101/2021.10.22.21265382}.

\item Bartley JE, Riedel MC, \textbf{Salo T}, Bottenhorn KL, Boeving ER, Laird RW, Sutherland MT, Pruden SM, Brewe E, \& Laird AR.
(2019).
Sex and pedagogy influences in physics learning-related reorganization of brain activation.
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