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Import and export features for tree sequence

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@jeromekelleher jeromekelleher released this 20 Jul 16:25

Feature release adding new import and export features to the API
and CLI.

  • New TreeSequence.write_records and TreeSequence.write_mutations
    methods to serialise a tree sequence in a human readable text format.
  • New msprime.load_txt() method that parses the above formats, and
    allows msprime to read in data from external sources.
  • New TreeSequence.write_vcf method to write mutation information
    in VCF format.
  • Miscellaneous documentation fixes.