Summer 2021 release copyright updates.

valeriuo · Jun 28, 2021 · ce9b492 · ce9b492
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diff --git a/LICENSE b/LICENSE
@@ -1,6 +1,6 @@
 The MIT/Expat License
 
-Copyright (C) 2008-2020 Genome Research Ltd.
+Copyright (C) 2008-2021 Genome Research Ltd.
 
 Permission is hereby granted, free of charge, to any person obtaining a copy
 of this software and associated documentation files (the "Software"), to deal

diff --git a/bam_addrprg.c b/bam_addrprg.c
@@ -1,6 +1,6 @@
 /* bam_addrprg.c -- samtools command to add or replace readgroups.
 
-   Copyright (c) 2013, 2015-2017, 2019-2020 Genome Research Limited.
+   Copyright (c) 2013, 2015-2017, 2019-2021 Genome Research Limited.
 
    Author: Martin O. Pollard <[email protected]>
 

diff --git a/bam_cat.c b/bam_cat.c
@@ -1,6 +1,6 @@
 /*  bam_cat.c -- efficiently concatenates bam files.
 
-    Copyright (C) 2008-2009, 2011-2013, 2015-2017, 2019 Genome Research Ltd.
+    Copyright (C) 2008-2009, 2011-2013, 2015-2017, 2019, 2021 Genome Research Ltd.
     Modified SAMtools work copyright (C) 2010 Illumina, Inc.
 
 Permission is hereby granted, free of charge, to any person obtaining a copy

diff --git a/bam_flags.c b/bam_flags.c
@@ -1,6 +1,6 @@
 /*  bam_flags.c -- flags subcommand.
 
-    Copyright (C) 2013-2014 Genome Research Ltd.
+    Copyright (C) 2013-2014, 2021 Genome Research Ltd.
 
     Author: Petr Danecek <[email protected]>
 

diff --git a/bam_plcmd.c b/bam_plcmd.c
@@ -1,6 +1,6 @@
 /*  bam_plcmd.c -- mpileup subcommand.
 
-    Copyright (C) 2008-2015, 2019-2020 Genome Research Ltd.
+    Copyright (C) 2008-2015, 2019-2021 Genome Research Ltd.
     Portions copyright (C) 2009-2012 Broad Institute.
 
     Author: Heng Li <[email protected]>

diff --git a/bam_sort.c b/bam_sort.c
@@ -1,6 +1,6 @@
 /*  bam_sort.c -- sorting and merging.
 
-    Copyright (C) 2008-2020 Genome Research Ltd.
+    Copyright (C) 2008-2021 Genome Research Ltd.
     Portions copyright (C) 2009-2012 Broad Institute.
 
     Author: Heng Li <[email protected]>

diff --git a/bedcov.c b/bedcov.c
@@ -1,7 +1,7 @@
 /*  bedcov.c -- bedcov subcommand.
 
     Copyright (C) 2012 Broad Institute.
-    Copyright (C) 2013-2014, 2018-2020 Genome Research Ltd.
+    Copyright (C) 2013-2014, 2018-2021 Genome Research Ltd.
 
     Author: Heng Li <[email protected]>
 

diff --git a/configure.ac b/configure.ac
@@ -34,7 +34,7 @@ m4_include([m4/hts_with_curses.m4])
 m4_include([m4/ax_with_htslib.m4])
 
 dnl Copyright notice to be copied into the generated configure script
-AC_COPYRIGHT([Portions copyright (C) 2015,2017 Genome Research Ltd.
+AC_COPYRIGHT([Portions copyright (C) 2015,2017, 2019 Genome Research Ltd.
 
 This configure script is free software: you are free to change and
 redistribute it.  There is NO WARRANTY, to the extent permitted by law.])

diff --git a/doc/samtools-ampliconclip.1 b/doc/samtools-ampliconclip.1
@@ -3,7 +3,7 @@
 .SH NAME
 samtools ampliconclip \- clip reads using a BED file
 .\"
-.\" Copyright (C) 2008-2011, 2013-2020 Genome Research Ltd.
+.\" Copyright (C) 2008-2011, 2013-2021 Genome Research Ltd.
 .\" Portions copyright (C) 2010, 2011 Broad Institute.
 .\"
 .\" Author: Andrew Whitwham <[email protected]>

diff --git a/doc/samtools-ampliconstats.1 b/doc/samtools-ampliconstats.1
@@ -3,7 +3,7 @@
 .SH NAME
 samtools ampliconstats \- produces statistics from amplicon sequencing alignment file
 .\"
-.\" Copyright (C) 2020 Genome Research Ltd.
+.\" Copyright (C) 2020-2021 Genome Research Ltd.
 .\"
 .\" Author: James Bonfield <[email protected]>
 .\"

diff --git a/doc/samtools-coverage.1 b/doc/samtools-coverage.1
@@ -3,7 +3,7 @@
 .SH NAME
 samtools coverage \- produces a histogram or table of coverage per chromosome
 .\"
-.\" Copyright (C) 2019 Genome Research Ltd.
+.\" Copyright (C) 2019, 2021 Genome Research Ltd.
 .\"
 .\" Author: James Bonfield <[email protected]>
 .\"

diff --git a/doc/samtools-depth.1 b/doc/samtools-depth.1
@@ -3,7 +3,7 @@
 .SH NAME
 samtools depth \- computes the read depth at each position or region
 .\"
-.\" Copyright (C) 2008-2011, 2013-2020 Genome Research Ltd.
+.\" Copyright (C) 2008-2011, 2013-2021 Genome Research Ltd.
 .\" Portions copyright (C) 2010, 2011 Broad Institute.
 .\"
 .\" Author: Heng Li <[email protected]>

diff --git a/doc/samtools-merge.1 b/doc/samtools-merge.1
@@ -3,7 +3,7 @@
 .SH NAME
 samtools merge \- merges multiple sorted files into a single file
 .\"
-.\" Copyright (C) 2008-2011, 2013-2019 Genome Research Ltd.
+.\" Copyright (C) 2008-2011, 2013-2019, 2021 Genome Research Ltd.
 .\" Portions copyright (C) 2010, 2011 Broad Institute.
 .\"
 .\" Author: Heng Li <[email protected]>

diff --git a/misc/export2sam.pl b/misc/export2sam.pl
@@ -9,7 +9,7 @@
 #
 # The MIT License
 #
-# Copyright (c) 2008-2010 Genome Research Ltd.
+# Copyright (c) 2008-2011 Genome Research Ltd.
 # Modifications Copyright (c) 2010 Illumina, Inc.
 #
 # Permission is hereby granted, free of charge, to any person obtaining a copy

diff --git a/test/test.pl b/test/test.pl
@@ -1,6 +1,6 @@
 #!/usr/bin/env perl
 #
-#    Copyright (C) 2013-2020 Genome Research Ltd.
+#    Copyright (C) 2013-2021 Genome Research Ltd.
 #
 #    Author: Petr Danecek <[email protected]>
 #