Releases: wen-chen/GCEN
Releases · wen-chen/GCEN
v0.6.3
07 Mar 02:18
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Added calculate_accuracy to calculate the accuracy of prediction;
The program network_stat added two statistics: degree centrality and network heterogeneity;
Performance of program annotate was improved;
Fix some minor bugs.
v0.6.2
09 Feb 15:46
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Added network_stat to calculate the statistics of network.
v0.6.1
26 Jan 15:21
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Added network_extract to extract subnetwork based on a gene list;
Added network_shuffle to random shuffle network with degree preserving;
Fix some bugs.
v0.6.0
06 Jan 16:02
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Added two programs csv_to_tsv and tsv_to_csv for converting tsv and csv files to each other;
The program data_norm adds an normalization method based housekeeping genes;
The program network_build add a new parameter -a/--all for output all edges without any cutoff;
Fix some bugs.
v0.5.2
30 Sep 09:49
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Support download via bioconda;
Use ghc::filesystem instead of std::filesystem for the cross-platform compatibility.
v0.5.1
27 Feb 08:18
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Use robin_hood::unordered_map instead of std::unordered_map for performance improvement;
The program rwr adds support for the weights and direction of the network;
The program data_norm adds support for the trimmed mean of M-values (TMM) algorithm;
The program data_filter adds support for filter based on a percentage (i.e. keep 75% of total genes).
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