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1. cobriniklab/chevreulShiny cobriniklab/chevreulShiny Public

   Processing, plotting, and interactive eda of full-length scRNA-seq as SingleCellExperiments

   R

2. cobriniklab/seuratTools cobriniklab/seuratTools Public

   Processing, plotting, and interactive eda of full-length scRNA-seq as seurat objects

   R 4 2

3. ARMOR_GTO ARMOR_GTO Public

   Simultaneous single cell DNA and deep full-length RNA sequencing using Genome Transcriptome One-tube (GTO) reveals subclonal heterogeneity in retinoblastoma tumors.

   Python

4. rb_exome rb_exome Public

   Non-synonymous, synonymous, and non-coding nucleotide variants contribute to recurrently altered biological processes during retinoblastoma progression

   R 1

5. cobriniklab/shayler_2023_workflow cobriniklab/shayler_2023_workflow Public

   A snakemake workflow to reproduce single cell processing steps used in manuscript from Shayler et al. 2023

   Python

6. osteosarcoma_ev_dna osteosarcoma_ev_dna Public

   Extracellular vesicle‐associated repetitive element DNAs as candidate osteosarcoma biomarkers

   HTML