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Merge pull request #44 from NDoering99/patch-19
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Update interaction_gathering.py
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talagayev authored Dec 14, 2023
2 parents c46c6f1 + c8a027e commit b29d169
Showing 1 changed file with 2 additions and 0 deletions.
2 changes: 2 additions & 0 deletions openmmdl/openmmdl_analysis/interaction_gathering.py
Original file line number Diff line number Diff line change
Expand Up @@ -222,6 +222,8 @@ def process_frame(frame, pdb_md, lig_name, special=None, peptide=None):
tmp_interaction['FRAME'] = int(frame)
tmp_interaction['INTERACTION'] = interaction_type
interaction_list = pd.concat([interaction_list, tmp_interaction])
if os.path.exists(f"processing_frame_{frame}.pdb"):
os.remove(f"processing_frame_{frame}.pdb")

if special is not None:
combi_lig_special = mda.Universe("ligand_special.pdb")
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