release 0.0.14

y9c · Apr 22, 2024 · 7df1388 · 7df1388
1 parent 2b9fef9
commit 7df1388
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Showing 9 changed files with 593 additions and 3 deletions.
diff --git a/cutseq/debug_short_R1.fastq.gz b/cutseq/debug_short_R1.fastq.gz
diff --git a/cutseq/debug_short_R2.fastq.gz b/cutseq/debug_short_R2.fastq.gz
diff --git a/cutseq/debug_trimmed_R1.fastq.gz b/cutseq/debug_trimmed_R1.fastq.gz
diff --git a/cutseq/debug_trimmed_R2.fastq.gz b/cutseq/debug_trimmed_R2.fastq.gz
diff --git a/cutseq/debug_untrimmed_R1.fastq.gz b/cutseq/debug_untrimmed_R1.fastq.gz
diff --git a/cutseq/debug_untrimmed_R2.fastq.gz b/cutseq/debug_untrimmed_R2.fastq.gz
diff --git a/cutseq/run.py b/cutseq/run.py
@@ -602,15 +602,15 @@ def main():
         "-s",
         "--short-file",
         type=str,
-        nargs="+",
+        nargs="*",
         help="Output file path for discarded too short data.",
     )
     # discard inline barcode untrimmed reads
     parser.add_argument(
         "-u",
         "--untrimmed-file",
         type=str,
-        nargs="+",
+        nargs="*",
         help="Output file path for discarded reads without inline barcode.",
     )
     parser.add_argument(