Update install setup

pyproject.toml

@@ -16,11 +16,13 @@ classifiers = [
 ]
 
 dependencies = [
+  "numpy",
+  "xarray",
   "pandas",
   "plotly",
   "matplotlib",
   "ruamel.yaml",
-  "pyarrow"
+  "pyarrow",
 ]
 
 [build-system]
@@ -38,21 +40,28 @@ Homepage = "https://github.com/ACCESS-NRI/esmf-trace"
 
 [project.optional-dependencies]
 devel = [
-    "ruff",
     "pre-commit",
 ]
+
 test = [
     "pytest",
     "pytest-cov",
 ]
 
+# Not required for the package but useful for users running notebooks
+interactive = [
+    "jupyter",
+    "ipykernel",
+]
+
 [tool.pytest.ini_options]
 addopts = [
   "--cov=esmf_trace",
   "--cov-report=term",
   "--cov-report=html",
   "--cov-report=xml"
 ]
+
 testpaths = ["tests"]
 
 [tool.coverage.run]

requirements-access.txt

@@ -0,0 +1,15 @@
+# Workspace environment for ACCESS profiling and scaling workflows.
+#
+# This file installs multiple ACCESS repos into a single virtual
+# environment for convenient imports and interactive development.
+#
+# It is not intended to represent the runtime requirements of any single
+# repo. Instead, it defines a curated workspace environment that
+# allows multiple tools to be used together.
+
+git+https://github.com/ACCESS-NRI/access-experiment-generator.git@main
+git+https://github.com/ACCESS-NRI/access-experiment-runner.git@main
+
+# Feature branches required for profiling work (not yet merged)
+-e git+https://github.com/ACCESS-NRI/access-profiling.git@47-om3-profiling_temporary#egg=access-profiling
+-e git+https://github.com/ACCESS-NRI/access-config-utils.git@32-accessom3-layout#egg=access-config-utils

setup.sh

@@ -2,12 +2,20 @@
 set -euo pipefail
 
 # Gadi setup for esmf-trace
-module load python3/3.11.7
 module use /g/data/vk83/modules
 module load model-tools/babeltrace2/2.1.2
 
 # Create venv and install
 python3 -m venv .venv
 . .venv/bin/activate
-pip install -r requirements.txt
+
+pip install --upgrade pip setuptools wheel
+
+# Install the package in editable mode for development
 pip install -e .
+
+# Install the interactive tooling for the notebooks
+pip install -e ".[interactive]"
+
+# Workspace bundle: install other ACCESS repos into the same venv for workflow convenience
+pip install -r requirements-access.txt