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The program is running too slowly

Status: Open.

#160 In AntonioDeFalco/SCEVAN;

· yi-96 opened on May 27, 2026

Maybe there is a fault in function of genesDE?

Status: Open.

#159 In AntonioDeFalco/SCEVAN;

· SSSJe opened on Apr 24, 2026

When subclones are not present, pipelineCNA throws an error due to a failed call to plotCNclonal: traceback is provided in question

Status: Open.

#158 In AntonioDeFalco/SCEVAN;

· kkkaslikar opened on Mar 20, 2026

What's wrong with you!!! :( "Phylogenic tree cannot be plotted (ggtree requires dplyr version 1.0.5) try downgrading dprly to 1.0.5 or upgrading ggtree"

Status: Open.

#156 In AntonioDeFalco/SCEVAN;

· SSSJe opened on Dec 29, 2025

Can SCEVAN draw a phylogenetic tree deduced from clonal structure of different samples from a patient? like Figure 6 from SCEVAN paper

Status: Open.

#154 In AntonioDeFalco/SCEVAN;

· SSSJe opened on Dec 18, 2025

Maybe There are some display problems about plotOncoHeat.

Status: Open.

#153 In AntonioDeFalco/SCEVAN;

· SSSJe opened on Dec 17, 2025

diffSubclones error

Status: Open.

#150 In AntonioDeFalco/SCEVAN;

· dariarom94 opened on Oct 7, 2025

Request for plotting code of Figure 7

Status: Open.

#149 In AntonioDeFalco/SCEVAN;

· yuhan1li opened on Sep 28, 2025

Confident normal cells being called as tumour

Status: Open.

#148 In AntonioDeFalco/SCEVAN;

· wudustan opened on Sep 4, 2025

Running multiSamplecomparison error.

Status: Open.

#147 In AntonioDeFalco/SCEVAN;

· MC2511 opened on Sep 2, 2025

How to set up the listNormCells in Multi-sample analysis?

Status: Open.

#146 In AntonioDeFalco/SCEVAN;

· MC2511 opened on Sep 2, 2025

multiSampleComparisonClonalCN additional things to fix

Status: Open.

#144 In AntonioDeFalco/SCEVAN;

· tkcaccia opened on Jul 24, 2025