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Update main README for standardized predictors

Status: Open.

#89 In BioGeMT/FuNmiRBench;

· stephaniesamm opened on May 7, 2026

Review Reports

Status: Open.

#86 In BioGeMT/FuNmiRBench;

· sgiannouk opened on Apr 28, 2026

Create Flowchart-image of the pipeline

Status: Open.

#77 In BioGeMT/FuNmiRBench;

· zacharopoulou opened on Mar 31, 2026

Standardized RNA-Seq experiments

Status: Open.

#75 In BioGeMT/FuNmiRBench;

· zacharopoulou opened on Mar 30, 2026

Quick start of main README.md should include the main use first

Status: Open.

#74 In BioGeMT/FuNmiRBench;

· zacharopoulou opened on Mar 30, 2026

Refactor benchmark.yaml

Status: Open.

#73 In BioGeMT/FuNmiRBench;

· zacharopoulou opened on Mar 30, 2026

Refactor meta data

Status: Open.

#72 In BioGeMT/FuNmiRBench;

· zacharopoulou opened on Mar 30, 2026

Refactor environment.yml for standardized predictors

Status: Open.

#71 In BioGeMT/FuNmiRBench;

· zacharopoulou opened on Mar 30, 2026

Refactor predictions_info.tsv

Status: Open.

#70 In BioGeMT/FuNmiRBench;

· zacharopoulou opened on Mar 30, 2026

Refactor mirna_experiment_info.tsv

Status: Open.

#68 In BioGeMT/FuNmiRBench;

· zacharopoulou opened on Mar 30, 2026

Create script to auto-fill control/condition samples

enhancementNew feature or requestNew feature or request

Status: Open.

#55 In BioGeMT/FuNmiRBench;

· sgiannouk opened on Mar 3, 2026

·  

M1 – Dataset & API freeze

Deploy online

Status: Open.

#54 In BioGeMT/FuNmiRBench;

· palexiou opened on Mar 3, 2026