Benchmarking Python package for functional miRNA target prediction

Finding substitution weights and gap penalties from pairs of labeled biological sequences

Store and retrieve aggregated population frequencies for genomic variants.

Autonomous agentic system for supervised machine learning model development.

A pipeline to search GEO/SRA for miRNA-related experiments (RNA-seq, CLIP, qPCR, etc.) with support for filters such as species, cell lines, perturbation type, and dates.

Working Repository for the MiRbind 2.0 project

Genomic interval annotation tool with transcript-first logic, supporting Ensembl GTFs, relative coordinates, and detailed region classification.

Localization-aware modeling of post-transcriptional regulation in 3′UTRs