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@DataBiosphere

Data Biosphere

We are creating a vibrant ecosystem of interoperable modules and data environments for the biomedical community.

Popular repositories Loading

  1. toil toil Public

    A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.

    Python 909 242

  2. dsub dsub Public

    Open-source command-line tool to run batch computing tasks and workflows on backend services such as Google Cloud.

    Python 268 47

  3. terra-ui terra-ui Public

    Web user interface for the Terra platform

    TypeScript 54 21

  4. leonardo leonardo Public

    Notebook service

    Scala 44 21

  5. terra-docker terra-docker Public

    Jupyter Notebook 28 35

  6. job-manager job-manager Public

    Job Manager API and UI for interacting with asynchronous batch jobs and workflows.

    TypeScript 26 5

Repositories

Showing 10 of 163 repositories
  • toil Public

    A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.

    Python 909 Apache-2.0 242 400 15 Updated Apr 21, 2025
  • findable-ui Public
    TypeScript 1 Apache-2.0 0 33 2 Updated Apr 19, 2025
  • jade-data-repo Public

    The Terra Data Repository built by the Jade team.

    Java 13 BSD-3-Clause 5 0 2 Updated Apr 19, 2025
  • azul Public

    Metadata indexer and query service used for AnVIL, HCA, LungMAP, and CGP

    Python 8 Apache-2.0 2 688 15 Updated Apr 19, 2025
  • terra-ui Public

    Web user interface for the Terra platform

    TypeScript 54 BSD-3-Clause 21 145 11 Updated Apr 18, 2025
  • consent Public

    Broad Institute Data Use Oversight System

    Java 11 BSD-3-Clause 2 0 4 Updated Apr 18, 2025
  • open-data-registry Public Forked from awslabs/open-data-registry

    A registry of publicly available datasets on AWS

    Python 0 Apache-2.0 990 0 0 Updated Apr 18, 2025
  • duos-ui Public

    Broad Institute Data Use Oversight System

    JavaScript 9 BSD-3-Clause 4 0 2 Updated Apr 18, 2025
  • leonardo Public

    Notebook service

    Scala 44 BSD-3-Clause 21 1 21 Updated Apr 18, 2025
  • terra-docker Public
    Jupyter Notebook 28 BSD-3-Clause 35 21 9 Updated Apr 18, 2025
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