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13 e2e eval tests fail on main: fixtures pin md5s the anvil15 corpus no longer contains

Status: Open.

#381 In DataBiosphere/meta-disco;

· NoopDog opened on Sep 6, 2026

Whole-file json.load sets the memory ceiling for every report that reads a run

Status: Open.

#374 In DataBiosphere/meta-disco;

· NoopDog opened on Sep 4, 2026

Two definitions of "classified" across the reports, reconciled only in prose

Status: Open.

#372 In DataBiosphere/meta-disco;

· NoopDog opened on Sep 4, 2026

Index files inherit from a parent matched by basename, so a duplicated name is a coin flip

Status: Open.

#371 In DataBiosphere/meta-disco;

· NoopDog opened on Sep 4, 2026

Map submitter tables to the five dimensions per dataset from the verbatim manifests (import-primary registry)

Status: Open.

#369 In DataBiosphere/meta-disco;

· NoopDog opened on Sep 4, 2026

Record chrY masking on the build from the XX/XY reference packaging name

Status: Open.

#367 In DataBiosphere/meta-disco;

· NoopDog opened on Sep 4, 2026

Resolve command-line reference-name disagreement at the build-row level, not by raw filename

Status: Open.

#365 In DataBiosphere/meta-disco;

· NoopDog opened on Sep 4, 2026

Two new dimensions: is_reference (study-independent resource) and attribution (individual vs aggregate)

Status: Open.

#364 In DataBiosphere/meta-disco;

· NoopDog opened on Sep 3, 2026

Derivation graph consistency and coverage: cross-route agreement, graph invariants, UC1 query

Status: Open.

#362 In DataBiosphere/meta-disco;

· NoopDog opened on Sep 3, 2026

Epic: derivation graph — typed, graded edges between files, samples, and donors

Status: Open.

#363 In DataBiosphere/meta-disco;

· NoopDog opened on Sep 3, 2026

Sample to donor: donor_of edges from the Azul manifest and public registries, pedigree as child_of

Status: Open.

#361 In DataBiosphere/meta-disco;

· NoopDog opened on Sep 3, 2026

Assemblies and their derivatives: assembled_from via the HPRC catalog, derived_from via the f1_assembly stem

Status: Open.

#360 In DataBiosphere/meta-disco;

· NoopDog opened on Sep 3, 2026