Merge pull request #165 from JULIELab/v2.6

V2.6

CHANGELOG.md

@@ -1,5 +1,62 @@
 # Changelog
 
+## v2.6.0 (17/11/2022)
+
+#### New components
+
+- [**new component**] Add GNP Multiplier for PMC DB Reader [#152](https://github.com/JULIELab/jcore-base/issues/152)
+- [**new component**] Add GNP multipliers for XMI and XML DB multiplier readers [#150](https://github.com/JULIELab/jcore-base/issues/150)
+- [**new component**] Add a GNormPlus UIMA component [#147](https://github.com/JULIELab/jcore-base/issues/147)
+- [**new component**] Add reader for NLM-Gene [#145](https://github.com/JULIELab/jcore-base/issues/145)
+- [**new component**] Add an MMAX2 reader. [#136](https://github.com/JULIELab/jcore-base/issues/136)
+- [**new component**] Add GNormPlus BioC XML reader [#131](https://github.com/JULIELab/jcore-base/issues/131)
+- [**new component**] Add a GNormPlus BioC Writer [#129](https://github.com/JULIELab/jcore-base/issues/129)
+- [**new component**] Add a PMC DB Reader [#128](https://github.com/JULIELab/jcore-base/issues/128)
+- [**new component**] Add a consumer to write relations to Neo4j [#113](https://github.com/JULIELab/jcore-base/issues/113)
+- [**new component**] Add an embedding writer [#102](https://github.com/JULIELab/jcore-base/issues/102)
+- [**new component**] Add a Flair embedding adding component [#101](https://github.com/JULIELab/jcore-base/issues/101)
+- [**new component**] Add a FLAIR NER component [#100](https://github.com/JULIELab/jcore-base/issues/100)
+
+#### General Enhancements
+
+- [**enhancement**] Add an annotation remover. [#154](https://github.com/JULIELab/jcore-base/issues/154)
+- [**enhancement**] Add a truncation size parameter to PMC XML multipliers [#153](https://github.com/JULIELab/jcore-base/issues/153)
+- [**enhancement**] Allow regular expression feature value filters for EntityConsumer [#146](https://github.com/JULIELab/jcore-base/issues/146)
+- [**enhancement**] Add H2-based annotation source for AnnotationAdder [#138](https://github.com/JULIELab/jcore-base/issues/138)
+- [**enhancement**] Add a feature-based format to the annotation adder [#137](https://github.com/JULIELab/jcore-base/issues/137)
+- [**enhancement**] Let GNP BioC writer add Gene annotations. [#134](https://github.com/JULIELab/jcore-base/issues/134)
+- [**enhancement**] Implement max XMI ID retrieval for the BioC GNormPlus Reader [#133](https://github.com/JULIELab/jcore-base/issues/133)
+- [**enhancement**] Add a mechanism to avoid mirror subset reset for updated JeDIS document whose text hasn't changed [#130](https://github.com/JULIELab/jcore-base/issues/130)
+- [**enhancement**] PMCReader: Add option to omit bibliographical references [#127](https://github.com/JULIELab/jcore-base/issues/127)
+
+#### Bug Fixes
+
+- [**bug**] Fix a bug where half of the DBMultiplierReader IDs were not actually processed [#144](https://github.com/JULIELab/jcore-base/issues/144)
+- [**bug**] ESConsumer: Fix bugs with cache index when resource file is updated [#126](https://github.com/JULIELab/jcore-base/issues/126)
+- [**bug**] Fix Bug in JSBD where Cut Away Types can still be included in the begin of a sentence. [#125](https://github.com/JULIELab/jcore-base/issues/125)
+- [**bug**] JSBD: Fix bug that occurs when cut away types and sentence delimiter types are given [#121](https://github.com/JULIELab/jcore-base/issues/121)
+
+#### Miscellaneous Changes
+
+- [**closed**] Map payloads to features for AnnotationAdder [#124](https://github.com/JULIELab/jcore-base/issues/124)
+- [**closed**] ES Consumer: Provide persistent Map and Addon terms providers [#123](https://github.com/JULIELab/jcore-base/issues/123)
+- [**closed**] Add a flow controller that creates a flow based on a CAS annotation [#120](https://github.com/JULIELab/jcore-base/issues/120)
+- [**closed**] JCoreOverlapIndex: Return the list instead of a stream [#117](https://github.com/JULIELab/jcore-base/issues/117)
+- [**closed**] lingpipe gazetteer: fix offset issues [#116](https://github.com/JULIELab/jcore-base/issues/116)
+
+---
+
+## v2.5.0 (13/05/2020)
+This release of JCoRe includes a lot of fixes, small enhancements and updated dependency libraries.
+The employed UIMA version is 2.10.4.
+New components include
+* JCoRe Flair NER AE
+* JCoRe Flair Embedding AE
+* JCoRe Cord19 Reader
+
+and more.
+---
+
 ## v2.4.0 (29/03/2019)
 This release sees quite a few bug fixes and streamline in various components.
 Most importantly, there are a few new components: