·
342 commits
to refs/heads/main
since this release
Changes
- simplify dependency and environment management @jonathanfischer97 (#85)
- Adaptive rates gillespie @sangmk (#84)
- Add math subpackage unittest @yingyue2030699 (#79)
- Bump networkx from 3.0 to 3.2.1 @dependabot[bot] (#64)
- Bump nvidia-curand-cu12 from 10.3.2.106 to 10.3.10.19 @dependabot[bot] (#65)
- Bump huggingface-hub from 0.32.2 to 0.33.2 @dependabot[bot] (#73)
- Bump the pip group across 1 directory with 7 updates @dependabot[bot] (#77)
- Attach Simularium converter and ProAffinity @sangmk (#52)
- Update README.md @yingyue2030699 (#46)
- Refactored histogram and copynumber data processing @sangmk (#47)
- Refactor data analysis logic @sangmk (#45)
ovito,imageio,Pillowas optional dependencies @jonathanfischer97 (#35)- Cleanup and restructure repo @yingyue2030699 (#33)
🚀 Features
- Implement a new pdb pipeline and refactor old code @yingyue2030699 (#82)
- Implement graph thoery based model @yingyue2030699 (#78)
- Update unittest.yml with coverage, caching, OS/version matrix @jonathanfischer97 (#41)
Contributors
yingyue2030699, jonathanfischer97, and sangmk