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Steinegger Lab

Steinegger Lab Github repositories

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  1. foldseek foldseek Public

    Foldseek enables fast and sensitive comparisons of large structure sets.

    C 873 105

  2. foldcomp foldcomp Public

    Compressing protein structures effectively with torsion angles

    C++ 164 14

  3. Metabuli Metabuli Public

    Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.

    C++ 127 10

  4. conterminator conterminator Public

    Detection of incorrectly labeled sequences across kingdoms

    C 81 7

  5. foldmason foldmason Public

    Multiple Protein Structure Alignment at Scale with FoldMason

    C 149 14

  6. unicore unicore Public

    Universal and efficient core gene phylogeny with Foldseek and ProstT5

    Rust 46 3

Repositories

Showing 10 of 28 repositories
  • Metabuli-App Public
    steineggerlab/Metabuli-App’s past year of commit activity
    HTML 23 GPL-3.0 2 0 0 Updated Jan 23, 2025
  • Metabuli Public

    Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.

    steineggerlab/Metabuli’s past year of commit activity
    C++ 127 GPL-3.0 10 15 0 Updated Jan 22, 2025
  • steineggerlab/foldmason-analysis’s past year of commit activity
    R 1 0 0 0 Updated Jan 22, 2025
  • unicore Public

    Universal and efficient core gene phylogeny with Foldseek and ProstT5

    steineggerlab/unicore’s past year of commit activity
    Rust 46 GPL-3.0 3 2 0 Updated Jan 21, 2025
  • foldseek Public

    Foldseek enables fast and sensitive comparisons of large structure sets.

    steineggerlab/foldseek’s past year of commit activity
    C 873 GPL-3.0 105 90 3 Updated Jan 20, 2025
  • folddisco Public

    Fast indexing and search of discontinuous motifs in protein structures

    steineggerlab/folddisco’s past year of commit activity
    Rust 18 GPL-3.0 2 4 0 Updated Jan 20, 2025
  • Metabuli-regression Public

    Regression tests for Metabuli

    steineggerlab/Metabuli-regression’s past year of commit activity
    Shell 0 GPL-3.0 0 0 0 Updated Jan 17, 2025
  • foldmason Public

    Multiple Protein Structure Alignment at Scale with FoldMason

    steineggerlab/foldmason’s past year of commit activity
    C 149 GPL-3.0 14 10 0 Updated Jan 14, 2025
  • foldseek-regression Public

    Regression test for foldseek

    steineggerlab/foldseek-regression’s past year of commit activity
    Shell 3 2 0 0 Updated Jan 13, 2025
  • bfvd-analysis Public

    Big Fantastic Virus Database (BFVD): Code used for analyses

    steineggerlab/bfvd-analysis’s past year of commit activity
    Shell 1 0 0 0 Updated Dec 16, 2024