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genelab

Here are 10 public repositories matching this topic...

nasa / GeneLab_Data_Processing

Standard bioinformatics pipelines for omics data from spaceflight and space-relevant experiments.

pipeline genetics genes omics genelab osdr

Updated Aug 12, 2026
Jupyter Notebook

nasa / GeneLab_AmpliconSeq_Workflow

Nextflow implementation of the GeneLab Amplicon Sequencing data processing pipeline.

workflow genomics microbiome amplicon-sequencing genelab

Updated Jul 2, 2026
R

sbl-sdsc / mcp-genelab

A Model Context Protocol (MCP) server for querying Neo4j Graph Databases with customized tools to query the NASA GeneLab Knowledge Graph

nasa mcp omics spaceflight omics-data-integration genelab proto-okn

Updated Oct 16, 2026
Python

LankyCyril / GLOpenAPI

NASA GeneLab Open API

comparative-genomics nasa-api differential-expression genelab genelab-api nasa-genelab

Updated Oct 3, 2023
Python

nasa / GeneLab_RNASeq_Workflow

Nextflow implementation of the GeneLab bulk RNASeq data processing pipelines.

workflow rna-seq genomics nextflow genes differential-expression genelab

Updated Oct 8, 2026
Python

GeneLab-AWG / GeneLab_AWGs

Official repository for GeneLab AWGs

bioinformatics nasa metagenomics multi-omics genelab plant-biology space-biology animal-biology

Updated Apr 11, 2024
R

nasa / GeneLab_MethylSeq_Workflow

Nextflow implementation of the GeneLab MethylSeq data processing pipelines.

workflow genomics methyl-seq genelab methylation-analysis rna-methylation

Updated Dec 1, 2025

Finsam / NASA-GeneLab-Dataset-Aggregation

Scripts from Summer 2020 NASA GeneLab Dataset Correction project.

batch-correction genelab

Updated Sep 3, 2020
R

dr-richard-barker / arabidopsis-drem-osdr

Cell-type-weighted regulatory prior for DREM over NASA OSDR Arabidopsis pseudo-time-series: a single-cell atlas that acts on the model, not just its annotation. SOG1/MYB3R attribution recovered with a built-in sog1-1 knockout control.

transcription-factors time-series reproducible-research single-cell arabidopsis fair-data genelab drem gene-regulatory-networks space-biology nasa-osdr dna-damage-response

Updated Oct 18, 2026
Python

nasa / GeneLab_Metagenomics_Workflow

Nextflow implementation of the GeneLab Metagenomics data processing pipelines.

workflow genomics nextflow metagenomics genelab

Updated Jun 18, 2026

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