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Switch to more recent sortmerna

enhancement

Status: Open.

#123 In bonsai-team/matam;

· bernt-matthias opened on Mar 30, 2025

Input fastq file

enhancement

Status: Open.

#120 In bonsai-team/matam;

· CaroB-M opened on Oct 20, 2023

Specify the --cpu 4 but only 1 cpu was utilized

bug

Status: Open.

#118 In bonsai-team/matam;

· zuopengl opened on Aug 15, 2023

Use Minimap2 for scaffolding instead of SortMeRNA

enhancement

Status: Open.

#116 In bonsai-team/matam;

· ppericard opened on May 11, 2023

·  

v1.7.0

Add Changelog following current standards

enhancement

Status: Open.

#115 In bonsai-team/matam;

· ppericard opened on May 11, 2023

·  

v1.6.2

Repatriate ComponentSearch in MATAM repo

enhancement

Status: Open.

#114 In bonsai-team/matam;

· ppericard opened on May 11, 2023

·  

v1.6.2

core-sga files

Status: Open.

#110 In bonsai-team/matam;

· joao1980 opened on Mar 10, 2023

can you please help me solve this issue

Status: Open.

#109 In bonsai-team/matam;

· triplem90manas opened on Aug 13, 2022

Get single marker gene from read

Status: Open.

#108 In bonsai-team/matam;

· Lcornet opened on May 19, 2022

matam_db_preprocessing.py clustering

Status: Open.

#107 In bonsai-team/matam;

· mdsufz opened on May 18, 2022

How to improve final alignement

Status: Open.

#106 In bonsai-team/matam;

· MonicaSteffi opened on Jan 25, 2022

Error in get the default SSU rRNA reference database

bug

Status: Open.

#105 In bonsai-team/matam;

· duu-123 opened on Dec 29, 2021